GenomicKB
Genomic Knowledgebase (GenomicKB) is a database that uses a knowledge graph to consolidate genomic datasets and annotations. GenomicKB integrates data from more than 30 consortia, in which the genomic entities and relationships are represented as diverse nodes and edges with properties.
Learn more from the original GenomicKB article >>
Cite: Feng, Fan, et al. "GenomicKB: a knowledge graph for the human genome." Nucleic Acids Research 51.D1 (2023): D950-D956. https://doi.org/10.1093/nar/gkac957
318,790,570
Nodes
1,131,257,092
Edges
3,902,460,300
Attributes
Example 1
Let's start with an easy question:
which common genomic variants locate in a gene of interest?

Example 2
Use eQTLs to match enhancers with genes!
Gene-enhancer pairs are identified when one eQTL locates in an enhancer and correlate with the expression of a nearby gene.
